Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937550.1_cds_XP_016482803.1_73989
CDS Infomation

[gene=LOC107803572] [db_xref=GeneID:107803572] [protein=putative late blight resistance protein homolog R1A-3 isoform X2] [protein_id=XP_016482803.1] [location=complement(join(38375..38381,38692..39920))] [gbkey=CDS]
Sequence

ATGGAACAAGTGGGAAGAGATTGTTGGGATGATCTTGTTAGTAGGAATCTGATAATGGTT
AGAAAGAGGAGATTTAATGGGGAGGCGAGAACATGTGGTGTCCATGATTTGGTTCGCGAC
TTGATTTTAAGAGAAGCTGAGAAAGAGAAGTTCTTGCAGGTTACTAGAGCTTACGAAGTC
ACGAATCATGTCCGTCACTACAGCTTCCATCCGGACATTTATGAGGCTGATTGCTGGGAG
TCCAGTCTCATCCGAACAGTGCACTTATGGGGATTTGGTCATTTTTTTCATTTTCAGCAC
TTCAAACTGCTGAGAGTGTTGGTAATCCCTTATTATGAGTTTCAAGATTTCCCTCTTGAG
ATAACAAAATTAGTACATCTCAGATACCTTCAGTTCTGGTGTAATGATGATATTCACCAG
TTAGTGTCAAAGCTATATAATCTGCATACCTTCATTTTTCGTCATGAAGGTCTTAAACCT
CCAACTATACCTGAGACAATTTGGAAAATGAAACATTTAAGGCATCTTCACGTCGTCAAG
AGAGTCTTTTCTCTTGCTATCCCGATTAAGTCTGGCTTCAAGCTAGAAAATTTGGAGGGA
CTTTCCTGTCTAAATTTGTCCAACTGTACTTATGAATTGTTTTCTGCTATTCCAAATCTT
AAGAGGCTGAAGATTTATGGAAATTGGAGGGAATGCAAGAGAGAGAAGATTTCCCAGCAC
CTAGATAGTCTTTCCTGTTTAAAAGAACTTGAAATATTGAAGTTCAGGTACCAAGGACGC
TACCGTCGCCGGCTACCAAGGAAGCTTTCTTTACCTACATCTCTGAAGAGGCTGACTTTA
AAAAATACTTTTTTTCTTCTGGAAGACTTGACAAATATTCTAACGTTGCCAAACCTCGAA
GTGCTTAAAATGAAAGATGTATTTTATAATGATGAGTGGATATTAAATGATGATGAGATT
TTCAGTCAACTTAAGTTTCTTCTAATCAGTGTAACATCTCTGAGGCACTGGAAAGCTGTG
AGTGTTAACTTCCCAAAACTACAACGCCTAGTTCTGAGAAGCTGCATAGGCCTGGAAGAA
ATCCCTAAAGACTTCGGAGAAATTTATAGCTTGGAGTCAATAGAATTGTATGACTGCAGT
ATGTCCACTGCAAAATCAGTGGAAGAACTTCGAGAAGAGCAAGAGAGCATGGGGAATGAT
TGCCTCAGTGTCGTCATCAATAATTGTGTGTATTGA

Peptide Sequence

PEP ID

XP_016482803.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Nicotiana tabacum]
Sequence

MEQVGRDCWDDLVSRNLIMVRKRRFNGEARTCGVHDLVRDLILREAEKEKFLQVTRAYEV
TNHVRHYSFHPDIYEADCWESSLIRTVHLWGFGHFFHFQHFKLLRVLVIPYYEFQDFPLE
ITKLVHLRYLQFWCNDDIHQLVSKLYNLHTFIFRHEGLKPPTIPETIWKMKHLRHLHVVK
RVFSLAIPIKSGFKLENLEGLSCLNLSNCTYELFSAIPNLKRLKIYGNWRECKREKISQH
LDSLSCLKELEILKFRYQGRYRRRLPRKLSLPTSLKRLTLKNTFFLLEDLTNILTLPNLE
VLKMKDVFYNDEWILNDDEIFSQLKFLLISVTSLRHWKAVSVNFPKLQRLVLRSCIGLEE
IPKDFGEIYSLESIELYDCSMSTAKSVEELREEQESMGNDCLSVVINNCVY

Transcript Sequence

Gene sequence data has not been registered.